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ISBN: 9781607614432

The feld of proteomics moves rapidly. New methods, techniques, applications, standards, models and software appear almost on a daily basis. Accompanying this are plenty of texts on the ex… Plus…

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Proteome Bioinformatics: 604 (Methods in Molecular Biology, 604) - edition reliée, livre de poche

2009, ISBN: 9781607614432

Editor: Hubbard, Simon J. Editor: Jones, Andrew R. Humana, Hardcover, Auflage: 2010, 416 Seiten, Publiziert: 2009-12-23T00:00:01Z, Produktgruppe: Book, 2.07 kg, Books Global Store, Specia… Plus…

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Hubbard, Simon J. [Editor]; Jones, Andrew R. [Editor];:
Proteome Bioinformatics (Methods in Molecular Biology) - edition reliée, livre de poche

2009

ISBN: 9781607614432

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Proteome Bioinformatics (Methods in Molecular Biology, 604) - edition reliée, livre de poche

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Simon Hubbard:
Proteome Bioinformatics - edition reliée, livre de poche

ISBN: 9781607614432

Hardback. New. This book probes the fluid field of proteomics, offering review and methodology chapters that address the fundamentals of analysis methods, algorithms, data standards and … Plus…

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Détails sur le livre
Proteome Bioinformatics: 604 (Methods in Molecular Biology, 604)

The field of proteomics moves rapidly, as new methods, techniques, applications, standards, models and software appear almost on a daily basis. In Proteome Bioinformatics, expert researchers explore this ever-changing field, providing the reader with a mix of review and methodology chapters which address the fundamentals of analysis methods, algorithms, data standards and databases. Chapters include practical considerations for analyzing database search results, annotating genomes, speeding up searches, and responding to specific data processing challenges. As a volume of the highly successful Methods in Molecular Biology series, this work provides the kind of detailed description and implementation advice that is crucial for getting optimal results. Comprehensive and ground-breaking, Proteome Bioinformatics is an essential guidebook for the novice and expert alike, covering topics that address a wide range of data analysis and management problems. TOC:An Introduction to Proteome Bioinformatics.- Bioinformatics Methods for Protein Identification Using Peptide Mass Fingerprinting.- Computational approaches to peptide identification via tandem MS. Scoring and validation of tandem MS peptide identification methods.- Target-Decoy Search Strategy for Mass Spectrometry-based Proteomics.- Understanding and Exploiting Peptide Fragment Ion Intensities Using Experimental and Informatic Approaches.- Spectral Library Searching for Peptide Identification via Tandem MS.- De novo Sequencing Methods in Proteomics.- Cross Species Proteomics.- Gene model detection using mass spectrometry.- Signal Processing in Proteomics.- A High-Performance Reconfigurable Computing Solution for Peptide Mass Fingerprinting.- Mining proteomic MS/MS data for MRM transitions.- OpenMS and TOPP: Open Source Software for LC-MS Data Analysis.- Trans-Proteomic Pipeline: A Pipeline For Proteomic Analysis.- Informatics and statistics for analyzing 2-D gel electrophoresis images.- Automated generic analysis tools for protein quantitation using stable isotope labelling.- An overview of label-free quantitation methods in proteomics by mass spectrometry.- The PeptideAtlas Project.- Using the PRIDE Proteomics Identifications Database for Knowledge Discovery and Data Analysis.- Molecular Interactions and data standardisation.- Mass Spectrometer Output File Format mzML.- Managing experimental data using FuGE.- Proteomics Data Collection (ProDaC).- Publishing and Collecting Proteomics Data Sets in Public Repositories using Standard Formats.- Computational Resources for the Prediction and Analysis of Native Disorder in Proteins.

Informations détaillées sur le livre - Proteome Bioinformatics: 604 (Methods in Molecular Biology, 604)


EAN (ISBN-13): 9781607614432
ISBN (ISBN-10): 160761443X
Version reliée
Livre de poche
Date de parution: 2010
Editeur: Humana
403 Pages
Poids: 0,933 kg
Langue: eng/Englisch

Livre dans la base de données depuis 2007-12-05T07:40:04+01:00 (Paris)
Page de détail modifiée en dernier sur 2023-11-26T19:19:08+01:00 (Paris)
ISBN/EAN: 9781607614432

ISBN - Autres types d'écriture:
1-60761-443-X, 978-1-60761-443-2
Autres types d'écriture et termes associés:
Auteur du livre: andy jones, andrew jones, ron hubbard
Titre du livre: bioinformatics


Données de l'éditeur

Auteur: Simon J. Hubbard; Andrew R. Jones
Titre: Methods in Molecular Biology; Proteome Bioinformatics
Editeur: Humana; Humana Press
404 Pages
Date de parution: 2009-12-23
Totowa; NJ; US
Imprimé / Fabriqué en
Poids: 2,070 kg
Langue: Anglais
106,99 € (DE)
109,99 € (AT)
118,00 CHF (CH)
POD
XII, 404 p. 92 illus.

BB; Theory of Computation; Hardcover, Softcover / Informatik, EDV/Informatik; Theoretische Informatik; Verstehen; Proteomics; algorithms; bioinformatics; databases; genes; genome; molecular biology; Protein Science; Bioinformatics; Proteomics; Theory of Computation; Protein Biochemistry; Bioinformatics; Biochemie; DV-gestützte Biologie/Bioinformatik; BC; EA

Table of Contents Table of Contents Preface Contributors 1. An Introduction to Proteome Bioinformatics Andrew R. Jones and Simon J. Hubbard 2. Bioinformatics Methods for Protein Identification Using Peptide Mass Fingerprinting Zhao Song, Luonan Chen, and Dong Xu 3. Computational approaches to peptide identification via tandem MS Simon J. Hubbard 4. Scoring and validation of tandem MS peptide identification methods Markus Brosch and Jyoti Choudhary 5. Target-Decoy Search Strategy for Mass Spectrometry-based Proteomics Joshua E. Elias and Steven P. Gygi 6. Understanding and Exploiting Peptide Fragment Ion Intensities Using Experimental and Informatic Approaches Ashley C. Gucinski, Eric D. Dodds, Wenzhou Li, and Vicki H. Wysocki 7. Spectral Library Searching for Peptide Identification via Tandem MS Henry Lam and Ruedi Aebersold 8. De novo Sequencing Methods in Proteomics Christopher Hughes, Bin Ma, and Gilles A. Lajoie 9. Cross Species Proteomics J. C. Wright, R. J. Beynon, and S. J. Hubbard 10. Gene model detection using mass spectrometry Bindu Nanduri, Nan Wang, Mark L. Lawrence, Susan M. Bridges, and Shane C. Burgess 11. Signal Processing in Proteomics Rene Hussong and Andreas Hildebrandt 12. A High-Performance Reconfigurable Computing Solution for Peptide Mass Fingerprinting Daniel Coca and Istvan Bogdan 13. Mining proteomic MS/MS data for MRM transitions Jennifer A. Mead, Luca Bianco, and Conrad Bessant 14. OpenMS and TOPP: Open Source Software for LC-MS Data Analysis Knut Reinert and Oliver Kohlbacher 15. Trans-Proteomic Pipeline: A Pipeline For Proteomic Analysis Patrick G. A. Pedrioli 16. Informatics and statistics for analyzing 2-D gel electrophoresis images Andrew W. Dowsey, Jeffrey S. Morris, Howard B. Gutstein, and Guang-Zhong Yang 17. Automated generic analysis tools for protein quantitation using stable isotope labelling Wen-Lian Hsu and Ting-Yi Sung 18. An overview of label-free quantitation methods in proteomics by mass spectrometry Jason W.H. Wong and Gerard Cagney 19. The PeptideAtlas Project Eric W. Deutsch 20. Using the PRIDE Proteomics Identifications Database for Knowledge Discovery and Data Analysis Philip Jones and Lennart Martens 21. Molecular Interactions and data standardisation Sandra Orchard and Samuel Kerrien 22. Mass Spectrometer Output File Format mzML Eric W. Deutsch 23. Managing experimental data using FuGE Andrew R. Jones and Allyson L. Lister 24. Proteomics Data Collection (ProDaC) - Publishing and Collecting Proteomics Data Sets in Public Repositories using Standard Formats Christian Stephan, Martin Eisenacher, Michael Kohl, and Helmut E. Meyer 25. Computational Resources for the Prediction and Analysis of Native Disorder in Proteins Melissa Pentony, Jonathan Ward, and David Jones

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